BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023H02SP1|AL428125
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1200 0.0
>3x_Contig1592
Length = 12307
Score = 1200 bits (604), Expect = 0.0
Identities = 605/606 (99%)
Strand = Plus / Minus
Query: 317 cagaacatgatacggtgtatgggttagttattaccaaaccatatatatcagtttcatgcg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12303 cagaacatgatacggtgtatgggttagttattaccaaaccatatatatcagtttcatgcg 12244
Query: 377 ctttaccacaattggttgttgggatgaaaagttttgacataacaatgctgcgagaagaag 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12243 ctttaccacaattggttgttgggatgaaaagttttgacataacaatgctgcgagaagaag 12184
Query: 437 tattctgaatgatcgaagaacagttggctggaagaactaggagaatttttcgacaccgat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12183 tattctgaatgatcgaagaacagttggctggaagaactaggagaatttttcgacaccgat 12124
Query: 497 ggatcttcagaaagtaaagaatgtagagttctgaggctagctcttttagtatagctgaat 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12123 ggatcttcagaaagtaaagaatgtagagttctgaggctagctcttttagtatagctgaat 12064
Query: 557 gtttcaactgaacttgtaactcaattgcaagctagctagtctgtattttccataaattat 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12063 gtttcaactgaacttgtaactcaattgcaagctagctagtctgtattttccataaattat 12004
Query: 617 tcaaaccactttaaagatcttagaatgcaaataactaagaaggtattttactgtgccata 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12003 tcaaaccactttaaagatcttagaatgcaaataactaagaaggtattttactgtgccata 11944
Query: 677 ttatgtattattcgtatagtatgacatcaacacatttaataagggcttaagtactctttg 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11943 ttatgtattattcgtatagtatgacatcaacacatttaataagggcttaagtactctttg 11884
Query: 737 aatgattgtaagtatcctgagcgatgcgatgtttataggaaacaactgttattttggcaa 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11883 aatgattgtaagtatcctgagcgatgcgatgtttataggaaacaactgttattttggcaa 11824
Query: 797 attttttgctgtgtgaattagaagctagtcataagtgtacttcgttttcgattgaacaat 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11823 attttttgctgtgtgaattagaagctagtcataagtgtacttcgttttcgattgaacaat 11764
Query: 857 cactataaggaatcattttcaatctgatagatgaatattaaatatcacctaccaatcgrc 916
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11763 cactataaggaatcattttcaatctgatagatgaatattaaatatcacctaccaatcgac 11704
Query: 917 gaattt 922
||||||
Sbjct: 11703 gaattt 11698
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7463
Number of Sequences: 1807
Number of extensions: 7463
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)